Resource
External Resources & Databases
A curated directory of external resources for addiction genetics and preclinical research, maintained in partnership with the NIDA Center for GWAS in Outbred Rats (ratgenes.org).
Rat genetics & genomics
- ratgenes.org, NIDA Center for GWAS in Outbred Rats (P50), including the HS Rats Research directory and eQTL mapping project
- RATTACA, request HS rats with genotype-predicted trait values (info · requests · results)
- RatGTEx Portal, gene expression and eQTLs across rat tissues
- Ratlas, snRNA-seq datasets
- PhenoGen Informatics, rat genomics and transcriptomics
- Rat Genome Database (RGD), the central rat genome resource
- UCSC Rat Genome Browser (mRatBN7.2/rn7)
- Rat Genome Project (Baylor HGSC)
- Hybrid Rat Diversity Panel (HRDP)
- C-GORD, Center for GWAS in Outbred Rats Database
- GeneNetwork2, web-based systems genetics
- Alliance of Genome Resources
- Rat Resource & Research Center (RRRC), rat models repository
Addiction research databases & tools
- Addiction Biobank, PARC’s behaviorally and genetically characterized samples (alcohol, cocaine, oxycodone)
- RGD Behavioral & Substance Use Disorder Portal
- OPAR, Omics Portal for Addiction Research
- ZSTAT: Genome-Wide Transcriptional Network Architecture of Drug Use Disorders
- NIDA Optogenetics and Transgenic Technology Core
- National Institute on Drug Abuse (NIDA)
Mouse & cross-species resources
- Mouse Genome Informatics (MGI)
- Mouse Phenome Database
- GenomeMUSter
- GeneWeaver
- Rat models of human diseases, systematic inventory
Training & meetings
- Cellular Biology of Addiction Course, Cold Spring Harbor Laboratory
- Institute for Behavioral Genetics workshop, University of Colorado Boulder
- Omics, Systems Genetics, and the Addictome webinar series
- Complex Trait Community annual meeting
- RatGenes on YouTube · Psychiatric Genomics Consortium on YouTube